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Table 3 List of homologous sequences that share pairwise sequence, and structural similarity to AvpA

From: Conservation of the C-type lectin fold for accommodating massive sequence variation in archaeal diversity-generating retroelements

  

AvpA Global Align

BackPhyre Analysis

  

Name

Pairwise % id

Confidence (%)

Coverage (%)

 

GROUNDWATER METAGNOME

id = 14867817

45

100

55

DGR-associated

id = 522254

45

100

98

id = 14894049

43

100

97

id = 14867370

41

100

99

id = 14359504

41

100

96

id = 14904902

41

100

95

id = 15062502

40

100

96

id = 14403915

39

100

96

id = 14959041

39

100

97

id = 14859104

38

100

95

id = 14276933

37

100

96

id = 14881015

35

100

96

id = 14886209

31

100

92

id = 14985427

28

99.9

92

id = 14881050

23

97.7

94

id = 14875328

23

99.4

95

id = 12307670

22

97.7

33

id = 12129794

20

99.2

93

id = 14864751

17

94.7

77

W.ARCHa

KHO51710

34

100

95

no DGR

KHO51690

22

95.1

35

KHO52343

21

98.1

23

KHO52822

21

96.8

41

KHO52030

20

98.9

99

KHO46485

17

93.7

98

  1. aW.ARCH: Woesearchaeota genomes GW2011 AR3 and GW2011 AR17