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Fig. 8 | BMC Structural Biology

Fig. 8

From: Comparative analysis of interactions between aryl hydrocarbon receptor ligand binding domain with its ligands: a computational study

Fig. 8

Different distance matrices depicting the smallest distance between residue pairs. The counter maps are calculated as the difference between the magnitude of pairwise distance fluctuations for the residues in a AhR LBD b AhRLBD-TCDD complex c AhRLBD-FICZ d AhRLBD-I3C complex e AhRLBD-DIM complex f AhRLBD-RES complex g AhRLBD-PTL complex during 100 ns MDS. The matrices are color coded, from red (higher distance) to blue (lower distance). The diagonal line represents the zero distances between the residues paired with themselves, while color spots represents the distances (nm) for each residue pair during 100 ns simulation

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