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Table 2 Different validation parameters obtained for confusion set of models

From: An improved protein structure evaluation using a semi-empirically derived structure property

Name of the proteins Validation Parameters of models
Models Energy Score Ramachandran Score G factor Verified 3D (% residue)
Albumin 1ao6 − 1.1969 × 105 88.50 0.22 92.39
1 −1.2280 × 105 95.1 0.16 94.53
2 −1.2297 × 105 95.4 0.18 96.58
3 −1.2269 × 105 94.7 0.1 97.09
4 −1.2262 × 105 94.1 0.17 96.75
5 −1.2283 × 105 95.2 0.17 99.15
Cytocrome c 1new −6.6803 × 103 65.50 −0.38 79.41
1 − 6.3532 × 103 93.1 −0.03 77.94
2 −6.3340 × 103 91.4 0.00 51.47
3 −6.3668 × 103 89.7 0.01 79.41
4 −6.3291 × 103 84.5 0.01 97.06
5 −6.2220 × 103 89.7 −0.03 73.53
Ferritin 1ro3 −3.4552 × 103 23.7 −0.42 100.00
1 −4.3944 × 103 76.3 −0.23 93.88
2 − 4.2660 × 103 78.9 −0.37 100.00
3 −4.3860 × 103 78.9 −0.21 91.84
4 −3.7259 × 103 65.8 −0.69 97.96
5 −3.9113 × 103 63.2 −0.85 100.00
Lysozyme 2vb1 −1.3138 × 104 88.50 0.01 100.00
1 −2.2767 × 104 93.8 0.06 100.00
2 −2.2488 × 104 93.8 0.05 100.00
3 −2.2639 × 104 91.2 0.04 100.00
4 −2.2616 × 104 94.7 0.08 100.00
5 −2.2564 × 104 94.7 0.03 100.00
Insulin 2h8b −7.5931 × 103 77.8 .28 0.00
1 −4.9314 × 103 84.8 −.16 0.00
2 −4.9427 × 103 91.3 −.22 0.00
3 −5.1093 × 103 91.3 −.08 0.00
4 −4.8367 × 103 80.4 −.15 0.00
5 −4.8419 × 103 80.4 −.10 0.00
Hemoglobin 1a3n −1.2495 × 105 94.0 .21 100.00
1 −1.2209 × 105 91.6 .05 100.00
2 −1.2216 × 105 91.4 .05 99.31
3 −1.2295 × 105 91.5 .05 99.31
4 −1.1820 × 105 88.9 −.26 100.00
5 −1.2216 × 105 91.4 .05 99.31