From: QRNAS: software tool for refinement of nucleic acid structures
RNA Puzzle #6 model | RMSD [Ã…] | INF_all | INF_nWC | Clashscore | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Starting | QRNAS | RNAfitme | sander | Starting | QRNAS | RNAfitme | sander | Starting | QRNAS | RNAfitme | sander | Starting | QRNAS | RNAfitme | sander | |
6_blanchet_1 | 21.39 | 22.29 | 22.34 | 22.30 | 0.761 | 0.754 | 0.742 | 0.761 | 0.462 | 0.462 | 0.405 | 0.462 | 0.74 | 0.00 | 1.28 | 0.55 |
6_blanchet_2 | 20.94 | 21.76 | 21.77 | 21.75 | 0.744 | 0.726 | 0.713 | 0.744 | 0.434 | 0.418 | 0.316 | 0.434 | 0.37 | 0.00 | 0.18 | 0.37 |
6_blanchet_3 | 20.57 | 21.32 | 21.32 | 21.31 | 0.745 | 0.754 | 0.696 | 0.745 | 0.405 | 0.452 | 0.337 | 0.405 | 0.55 | 0.00 | 1.10 | 0.74 |
6_blanchet_4 | 21.46 | 22.21 | 22.24 | 22.22 | 0.763 | 0.752 | 0.724 | 0.763 | 0.418 | 0.434 | 0.372 | 0.418 | 0.55 | 0.18 | 1.47 | 0.55 |
6_blanchet_5 | 23.54 | 24.19 | 24.18 | 24.18 | 0.724 | 0.728 | 0.706 | 0.724 | 0.337 | 0.372 | 0.337 | 0.337 | 0.74 | 0.55 | 0.92 | 0.74 |
6_bujnicki_1 | 36.50 | 37.00 | 36.98 | 36.96 | 0.720 | 0.721 | 0.729 | 0.720 | 0.300 | 0.224 | 0.194 | 0.300 | 0.55 | 0.00 | 0.55 | 0.55 |
6_bujnicki_2 | 30.47 | 30.93 | 30.90 | 30.89 | 0.701 | 0.692 | 0.699 | 0.701 | 0.254 | 0.337 | 0.323 | 0.254 | 1.29 | 0.18 | 1.10 | 1.29 |
6_bujnicki_3 | 31.79 | 32.14 | 32.11 | 32.09 | 0.637 | 0.638 | 0.651 | 0.637 | 0.258 | 0.258 | 0.270 | 0.258 | 1.11 | 0.37 | 0.92 | 1.11 |
6_bujnicki_4 | 31.64 | 32.07 | 32.05 | 32.04 | 0.657 | 0.652 | 0.646 | 0.657 | 0.135 | 0.135 | 0.115 | 0.135 | 1.84 | 0.18 | 1.28 | 1.84 |
6_chen_1 | 23.89 | 24.30 | 24.29 | 24.29 | 0.673 | 0.676 | 0.690 | 0.673 | 0.200 | 0.183 | 0.237 | 0.200 | 0.37 | 0.00 | 0.37 | 0.37 |
6_chen_2 | 21.73 | 22.13 | 22.17 | 22.15 | 0.656 | 0.662 | 0.663 | 0.656 | 0.200 | 0.283 | 0.254 | 0.200 | 0.18 | 0.18 | 0.55 | 0.18 |
6_chen_3 | 23.25 | 23.62 | 23.62 | 23.63 | 0.681 | 0.674 | 0.685 | 0.681 | 0.200 | 0.200 | 0.183 | 0.200 | 0.55 | 0.18 | 0.55 | 0.55 |
6_chen_4 | 21.71 | 22.15 | 22.11 | 22.12 | 0.669 | 0.688 | 0.699 | 0.669 | 0.224 | 0.298 | 0.316 | 0.224 | 1.84 | 0.18 | 1.65 | 1.84 |
6_chen_5 | 23.17 | 23.56 | 23.52 | 23.53 | 0.672 | 0.676 | 0.676 | 0.669 | 0.224 | 0.149 | 0.183 | 0.224 | 17.51 | 10.69 | 12.29 | 17.14 |
6_das_2 | 13.05 | 13.48 | 13.46 | 13.45 | 0.765 | 0.766 | 0.744 | 0.765 | 0.422 | 0.462 | 0.488 | 0.422 | 20.65 | 0.00 | 10.64 | 20.28 |
6_das_3 | 15.26 | 15.57 | 15.54 | 15.54 | 0.756 | 0.755 | 0.750 | 0.756 | 0.488 | 0.513 | 0.422 | 0.488 | 18.79 | 0.18 | 7.89 | 19.90 |
6_das_4 | 11.29 | 11.62 | 11.61 | 11.59 | 0.766 | 0.770 | 0.749 | 0.766 | 0.488 | 0.513 | 0.537 | 0.488 | 28.02 | 4.98 | 15.04 | 28.39 |
6_das_5 | 15.29 | 15.58 | 15.57 | 15.56 | 0.782 | 0.796 | 0.789 | 0.782 | 0.488 | 0.537 | 0.474 | 0.488 | 14.74 | 0.00 | 6.97 | 14.56 |
6_dokholyan_1 | 25.32 | 26.07 | 26.05 | 26.05 | 0.705 | 0.705 | 0.704 | 0.705 | 0.323 | 0.299 | 0.488 | 0.323 | 11.06 | 0.00 | 6.97 | 11.24 |
6_dokholyan_2 | 25.92 | 26.58 | 26.57 | 26.55 | 0.703 | 0.718 | 0.706 | 0.703 | 0.298 | 0.270 | 0.239 | 0.298 | 9.40 | 0.00 | 5.50 | 9.22 |
6_dokholyan_3 | 25.58 | 26.21 | 26.20 | 26.18 | 0.691 | 0.696 | 0.689 | 0.691 | 0.298 | 0.298 | 0.283 | 0.298 | 9.22 | 0.00 | 5.69 | 9.40 |
6_dokholyan_4 | 24.27 | 24.95 | 24.95 | 24.93 | 0.708 | 0.691 | 0.725 | 0.708 | 0.338 | 0.338 | 0.299 | 0.338 | 9.59 | 0.00 | 6.42 | 9.95 |
6_dokholyan_5 | 22.07 | 22.62 | 22.60 | 22.58 | 0.704 | 0.708 | 0.709 | 0.704 | 0.338 | 0.316 | 0.447 | 0.338 | 10.51 | 0.00 | 7.71 | 10.69 |
average | 23.05 | 23.58 | 23.57 | 23.56 | 0.712 | 0.713 | 0.708 | 0.712 | 0.327 | 0.337 | 0.365 | 0.327 | 6.96 | 0.78 | 4.22 | 7.02 |