Fig. 3
From: Characterization of putative proteins encoded by variable ORFs in white spot syndrome virus genome
Structural analysis of the proteins encoded by ORFs containing variable number of tandem repeats. a, b, c Schematic representation of putative proteins encoded by wsv129 (ORF75), wsv178 (ORF94) and wsv249 (ORF125). VNTR regions are presented in yellow, the numbers correspond to repeat units (RUs). Transmembrane regions (TM) and the Ring Finger domain (RING) are highlighted in blue in each respective scheme. The nuclear localization signal of each RU is shown in red. The graphs below each scheme indicate the folded (green) and unfolded (red) regions predicted by FoldIndex. In each graph,ic the x-axis indicates the amino acid positions and the y-axis represents the probability scores. d, e Three-dimensional models of wsv249 regions corresponding to Ankyrin (d) and RING domains (e). Conserved subdomains and amino-acids are presented in each 3D-model