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Table 2 Statistics of the LP/MS filter docking run

From: MTMDAT-HADDOCK: High-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry

Docking statistics of the filter run

Cluster No.a

distance to patch 1 (Ã…)b

distance to patch 2 (Ã…)

HADDOCK scorec

No. of structuresd

1

14.90

2.58

-80.0

44 (2)

2

11.39

3.47

-73.6

51 (1)

3

4.54

18.63

-73.4

24 (3)

4

7.45

15.01

-60.9

5 (8)

5

13.52

4.35

-60.5

6 (7)

6

23.12

3.57

-56.8

15 (5)

7

15.26

4.18

-50.4

15 (4)

8

19.99

4.08

-49.4

4 (9)

9

8.52

6.07

-46.5

9 (6)

  1. a: Ranked by HADDOCK score.
  2. b: The average distance of all residues in the interface of the docked model towards the center of the interface of the reference structure.
  3. c: The average HADDOCK score of the four lowest energy structures in the cluster.
  4. d: In parentheses the rank concerning the number of structure is shown.