Cut | Regular | Centered | Optimized | ||||||
---|---|---|---|---|---|---|---|---|---|
Prediction | Mean | Stdev | p | Mean | Stdev | p | Mean | Stdev | p |
IPknot | 1.13 | 0.32 | 0.002 | 1.23 | 0.36 | 0.000 | 1.21 | 0.36 | 0.000 |
pknotsRG | 1.19 | 0.50 | 0.005 | 1.27 | 0.49 | 0.000 | 1.27 | 0.47 | 0.000 |
HotKnots | 1.19 | 0.48 | 0.003 | 1.32 | 0.50 | 0.000 | 1.33 | 0.50 | 0.000 |
NUPACK | 1.12 | 0.34 | 0.010 | 1.23 | 0.41 | 0.000 | 1.24 | 0.41 | 0.000 |
PKNOTS | 1.33 | 0.19 | 0.000 | 1.65 | 0.35 | 0.000 | 1.70 | 0.35 | 0.000 |
UNAFold | 1.19 | 0.49 | 0.003 | 1.31 | 0.47 | 0.000 | 1.31 | 0.46 | 0.000 |
RNAfold | 1.19 | 0.46 | 0.002 | 1.31 | 0.48 | 0.000 | 1.30 | 0.45 | 0.000 |