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Table 1 Positions of the cytokine-receptor binding sites in known structures of ternary and binary complexes.

From: A model of the ternary complex of interleukin-10 with its soluble receptors

Cytokine-receptor complexes (PDB code/reference)

Site I (Ligand/Receptor)

Site II (Ligand/Receptor)

Site III (Recept/Recept)

 

SSE* Ligand

SSE* Receptor

SSE* Ligand

SSE* Receptor

Contacting Domains

Ternary complexes

     

hGH/GHbp/GHbp (3HHR [23])

A, loop AB, D

L1, L3-L6

A, C

L1, L3-L6

D2-D2

hEPO/sEPOR/sEPOR (1EER [24])

A, loop AB, D

L1-L6

A, C

L1-L3, L5, L6

no interaction

oPL/srPRLR/srPRLR (1F6F [25])

A, loop AB, D

L1-L6

A, C

L1-L4

D2-D2

hIL6/sIL6Rα /gp130 (D1-D3) (1P9M [29])

A, D

L2-L6

A, C

L1-L3, L5

D2-D3

Binary complexes

     

hINF-γ /sINF-γ Rα ** (1FG9 [53])

A, loop AB, F'

L2, L3, L5, L6

   

hLIF/gp130 (D2-D3) (1PVH [54])

  

A, C

L2, L3, L5

 

G-CSF/G-CSFR (BN-BC) (1CD9 [27])

  

A, C

L2-L6

 

hIL4/IL4-R1 (1IAR [26])

  

A, C

L1-L6

 

hIL-10/sIL-10R1** (1J7V [22])

A, loop AB, F'

L2-L6

   

cmvIL-10/sIL-10R1** (1LQS [55])

A, loop AB, F'

L2-L6

   

vIL-6/gp130 (1I1R [56])

  

A, C

L2, L3, L5

 

Ternary hIL-10 complex

     

hIL10/sIL10R1/sIL10R2**,***

A, loop AB, F'

L2-L6

A, D

L2, L3, L5, L6

D2-D2

  1. (*)- SSE: Secondary structure elements.
  2. (**)- In INF-γ and IL-10 structures helix F' is a topological equivalent of helix D of other helical cytokines.
  3. (***)- Interface areas were calculated with program Surface (CCP4) using spherical probe of the radius 1.40 Ã…2.