Table 4 Performance evaluation of the energy function on hg_structal decoy set
From: Scoring predictive models using a reduced representation of proteins: model and energy definition
Decoy set | PDB id. | rank native | RMSD | Z-score | cc | F.E. |
|---|---|---|---|---|---|---|
hg_structal | 1ash | 1/30 | 0.0 | -2.0 | 0.62 | 66.7 |
hg_structal | 1bab-B | 3/30 | 0.8 | -1.4 | 0.83 | 66.7 |
hg_structal | 1col-A | 1/30 | 0.0 | -4.8 | 0.73 | 33.3 |
hg_structal | 1cpc-A | 1/30 | 0.0 | -3.4 | 0.61 | 33.3 |
hg_structal | 1ecd | 28/30 | 1.5 | 1.8 | 0.57 | 33.3 |
hg_structal | 1emy | 3/30 | 0.8 | -1.9 | 0.81 | 100.0 |
hg_structal | 1flp | 3/30 | 1.9 | -1.5 | 0.44 | 33.3 |
hg_structal | 1gdm | 1/30 | 0.0 | -3.0 | 0.82 | 100.0 |
hg_structal | 1hbg | 1/30 | 0.0 | -2.2 | 0.54 | 33.3 |
hg_structal | 1hbh-A | 2/30 | 1.1 | -1.6 | 0.87 | 33.3 |
hg_structal | 1hbh-B | 5/30 | 1.0 | -1.1 | 0.80 | 33.3 |
hg_structal | 1hda-A | 2/30 | 0.5 | -1.5 | 0.92 | 66.7 |
hg_structal | 1hda-B | 1/30 | 0.0 | -1.4 | 0.84 | 100.0 |
hg_structal | 1hlb | 9/30 | 2.9 | -0.4 | 0.55 | 33.3 |
hg_structal | 1hlm | 30/30 | 4.0 | 2.3 | 0.21 | 33.3 |
hg_structal | 1hsy | 5/30 | 0.9 | -1.3 | 0.82 | 66.7 |
hg_structal | 1ith-A | 1/30 | 0.0 | -2.6 | 0.78 | 66.7 |
hg_structal | 1lht | 30/30 | 0.8 | 3.0 | 0.41 | 66.7 |
hg_structal | 1mba | 1/30 | 0.0 | -1.7 | 0.72 | 33.3 |
hg_structal | 1mbs | 30/30 | 1.8 | 2.2 | 0.52 | 66.7 |
hg_structal | 1myg-A | 1/30 | 0.0 | -2.0 | 0.82 | 66.7 |
hg_structal | 1myj-A | 2/30 | 0.6 | -1.8 | 0.86 | 66.7 |
hg_structal | 1myt | 1/30 | 0.0 | -2.3 | 0.72 | 66.7 |
hg_structal | 2dhb-A | 8/30 | 0.8 | -0.8 | 0.85 | 66.7 |
hg_structal | 2dhb-B | 8/30 | 1.0 | -0.7 | 0.83 | 66.7 |
hg_structal | 2lhb | 1/30 | 0.0 | -2.6 | 0.71 | 33.3 |
hg_structal | 2pgh-A | 5/30 | 1.0 | -1.2 | 0.91 | 33.3 |
hg_structal | 2pgh-B | 7/30 | 0.8 | -0.8 | 0.85 | 33.3 |
hg_structal | 4sdh-A | 1/30 | 0.0 | -3.6 | 0.70 | 33.3 |