Table 9 Performance evaluation of the energy function on semfold decoy set
From: Scoring predictive models using a reduced representation of proteins: model and energy definition
Decoy set | PDB id. | rank native | RMSD | Z-score | cc | F.E. |
|---|---|---|---|---|---|---|
semfold | 1ctf | 1/11402 | 0.0 | -4.7 | 0.13 | 19.7 |
semfold | 1e68 | 5/11361 | 4.5 | -2.3 | 0.09 | 21.0 |
semfold | 1eh2 | 69/11442 | 0.3 | -2.3 | 0.06 | 13.3 |
semfold | 1khm | 10/21081 | 11.4 | -3.0 | 0.02 | 11.3 |
semfold | 1nkl | 4/11662 | 0.2 | -3.5 | 0.09 | 19.4 |
semfold | 1pgb | 1/11282 | 0.0 | -3.1 | 0.03 | 12.7 |