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Table 2 Data collection and refinement statistics.

From: Ligand-induced conformational changes in a thermophilic ribose-binding protein

 

tmRBP-apo

tmRBP-ribose

Data Collection

  

   Wavelength (Å)

0.997

0.979

   Resolution (Å)

1.40

2.15

   Unique reflections

115460

25783

   Mean I/σ(I)a

34.2 (1.7)

25.7 (3.6)

   Completeness (%)a

99.0 (88.8)

80.9 (21.0)

   Rsym (%)a

5.0 (51.5)

5.6 (28.4)

   Redundancya

5.8 (3.4)

5.8 (1.6)

Refinement

  

   Resolution (Å)

50.0–1.40

50.0–2.15

   Num. of Reflections (working set/test set)

115460/5767

23715/1354

   Rcryst (%)

18.0 (28.0)

19.3 (25.4)

   Rfree b (%)

20.3 (32.9)

22.3 (29.2)

   Number of atoms

  

Protein

4326

2286

Water

627

142

Ligand

0

10

r.m.s.d.

  

   Bond lengths (Å)

0.009

0.012

   Bond angles (°)

1.2

1.2

Average B-factor (Ã… 2 )

  

   Main Chain

15.3

34.5

   Side Chain

17.3

35.8

   Solvent

29

37.7

   Ligand

 

24.8

Protein Geometry

  

   Ramachandran outliers (%)

0.4

0.3

   Ramachandran favored (%)

98.7

97.6

   Rotamer outliers (%)

2.2

3.0

  1. aNumber in parentheses represent values in the highest resolution shell.
  2. bRfree is the R-factor based on 5% of the data excluded from refinement.