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Table 3 Homodimeric interfaces of E glycoprotein

From: Prediction of protein-protein interactions in dengue virus coat proteins guided by low resolution cryoEM structures

Interacting chains Immature at neutral pH (3C6D)* Immature at acidic pH (3C6R)# Mature at neutral pH (1P58)
AB A245 (7.8; h) P80 (6.1; h), G223 (3.2; m), D225 (7.0; h) E133 (1.7; l), P166 (7.5; h), S169 (3.2; m), R188 (6.5; h)
AC - - G78 (3.8; m), P80 (3.8; m), Q86 (2.0; l), L221 (6.1; h), P222 (7.5; h), G228 (3.7; m), N230 (7.2; h)
BA - L56 (8.5; h), G78 (3.7; m), V129 (7.9; h), R210 (3.4; m), P222 (7.6; h) L389 (8.5; h), D390 (7.2; h), W391 (6.9; h)
BC - G5 (7.4; h), G100 (7.4; h), F108 (7.3; h), V151 (7.9; h), G152 (7.4; h), L253 (7.5; h), G258 (7.4; h), T315 (7.3; h) G100 (7.4; h), G102 (7.4; h), F108 (7.3; h), G258 (7.1; h)
CA - L389 (6.2; h) G78 (5.6; m), L221 (6.3; h), P222 (7.5; h), A224 (4.1; m), G228 (7.1; h), N230 (7.3; h)
CB - G5 (7.4; h), G100 (7.4; h), F108 (7.3; h), V151 (7.9; h), G152 (7.4; h), L253 (7.5; h), G258 (7.4; h), T315 (7.3; h) G100 (7.4; h), G102 (7.5; h), F108 (7.4; h), G258 (7.4; h)
  * Interacting chains are arranged in parallel # Interacting chains are arraged end-to-end  
  1. List of residues of E glycoprotein chains (A, B and C) participating in the interactions amongst themselves. The residues listed in every column belong to the fist chain in the pair of chains listed; confidence scores are given in the brackets where "h" stands for high, "m" for medium while "l" for low confidence.