Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 3 Homodimeric interfaces of E glycoprotein

From: Prediction of protein-protein interactions in dengue virus coat proteins guided by low resolution cryoEM structures

Interacting chains Immature at neutral pH (3C6D)* Immature at acidic pH (3C6R)# Mature at neutral pH (1P58)
AB A245 (7.8; h) P80 (6.1; h),
G223 (3.2; m),
D225 (7.0; h)
E133 (1.7; l),
P166 (7.5; h),
S169 (3.2; m),
R188 (6.5; h)
AC - - G78 (3.8; m),
P80 (3.8; m),
Q86 (2.0; l),
L221 (6.1; h),
P222 (7.5; h),
G228 (3.7; m),
N230 (7.2; h)
BA - L56 (8.5; h),
G78 (3.7; m),
V129 (7.9; h),
R210 (3.4; m),
P222 (7.6; h)
L389 (8.5; h),
D390 (7.2; h),
W391 (6.9; h)
BC - G5 (7.4; h),
G100 (7.4; h),
F108 (7.3; h),
V151 (7.9; h),
G152 (7.4; h),
L253 (7.5; h),
G258 (7.4; h),
T315 (7.3; h)
G100 (7.4; h),
G102 (7.4; h),
F108 (7.3; h),
G258 (7.1; h)
CA - L389 (6.2; h) G78 (5.6; m),
L221 (6.3; h),
P222 (7.5; h),
A224 (4.1; m),
G228 (7.1; h),
N230 (7.3; h)
CB - G5 (7.4; h),
G100 (7.4; h),
F108 (7.3; h),
V151 (7.9; h),
G152 (7.4; h),
L253 (7.5; h),
G258 (7.4; h),
T315 (7.3; h)
G100 (7.4; h),
G102 (7.5; h),
F108 (7.4; h),
G258 (7.4; h)
  * Interacting chains are arranged in parallel # Interacting chains are arraged end-to-end  
  1. List of residues of E glycoprotein chains (A, B and C) participating in the interactions amongst themselves. The residues listed in every column belong to the fist chain in the pair of chains listed; confidence scores are given in the brackets where "h" stands for high, "m" for medium while "l" for low confidence.