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Table 1 Parameterization. Performance of the clustering algorithm when grouping known active sites.

From: Assessing the structural conservation of protein pockets to study functional and allosteric sites: implications for drug discovery

Fixed distance value (Å) % total active sites % non active sites
0.0 59.60 4.46
1.0 69.89 5.31
2.0 76.47 8.95
3.0 79.13 13.67
4.0 82.78 17.30
5.0 83.50 23.04
6.0 86.71 27.90
7.0 87.43 34.68
8.0 87.62 41.97
9.0 88.24 49.59
10.0 89.29 56.87