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Table 3 The overlaps and correlations between the observed conformation changes and the most involved modes using different models and the open conformations

From: Generalized spring tensor models for protein fluctuation dynamics and conformation changes

Protein Overlap in ANM Correlation in ANM Overlap in STeM Correlation in STeM
Adenylate kinase 0.49(1) 0.62(1) 0.55(1) 0.63 (1)
Alcohol dehydrogenase 0.69(3) 0.54(9) 0.73 (2) 0.65 (30)
Annexin V 0.33(1) 0.60(32) 0.33 (1) 0.56 (22)
Aspartate aminotransferase 0.56(9) 0.63(9) 0.68 (6) 0.67 (6)
Calmodulin 0.44(5) 0.62 (77) 0.48 (1) 0.62 (16)
Che Y protein 0.46(1) 0.78(12) 0.40(1) 0.74(1)
Citrate synthase 0.48(7) 0.72(26) 0.49(5) 0.63(5)
Dihydrofolate reductase 0.71(1) 0.65(1) 0.73(1) 0.66(1)
Diphtheria toxin 0.43(1) 0.69(2) 0.50(2) 0.73(2)
Enolase 0.31(1) 0.45(34) 0.32(1) 0.49(53)
HIV-1 protease 0.67(1) 0.78 (10) 0.85 (1) 0.90(1)
Immunoglobulin 0.68(3) 0.57(3) 0.66(3) 0.58(3)
Lactoferrin 0.48(1) 0.64(24) 0.48(1) 0.70(36)
LAO binding protein 0.81(1) 0.74(1) 0.87(1) 0.80(1)
Maltodextrin binding protein 0.77(2) 0.66(2) 0.80(2) 0.70(2)
Seryl-tRNA synthetase 0.21(4) 0.59(10) 0.21(4) 0.60(37)
Thymidylate synthase 0.37(4) 0.69(9) 0.44(3) 0.68(9)
Triglyceride lipase 0.35(15) 0.50(25) 0.30(14) 0.56(24)
Triose phosphate isomerase 0.15(38) 0.28(11) 0.14(7) 0.30(8)
Tyrosine phosphatase 0.41(2) 0.57(27) 0.42(1) 0.59(25)