A conformation ensemble approach to protein residue-residue contact

BMC Structural Biology

Table 5 The average loss on CASP9 FM targets

Ranking Mechanism	Avg. Loss (in GDT-TS score)
Scoring w/conformation ensemble contacts	0.07
MULTICOM (QA)	0.07
MULTICOM-CLUSTER (QA)	0.08
Random baseline measure	0.17

Models ranked by satisfaction of contacts predicted by conformation ensemble approach. Random baseline measure is the loss of middlemost model from a group when ranked by GDT-TS score.

ISSN: 1472-6807