Table 1 Secondary structures distribution at protein interface, surface and core
From: Deciphering the shape and deformation of secondary structures through local conformation analysis
| Â | Interface | Surface | Core | All |
|---|---|---|---|---|
Complete dataset | ||||
α | 25.7 | 26.8 | 32.8 | 28.6 |
β | 18.4 | 15.9 | 32.6 | 21.7 |
loop | 36.3 | 37.4 | 23.0 | 32.6 |
border | 19.6 | 16.8 | 13.6 | 17.1 |
Homodimers/Heterodimers | ||||
α | 24.3/19.5 | 27.1/21.2 | 32.3/28.5 | 28.2/22.6 |
β | 18.8/25.2 | 15.1/20.4 | 32.1/38.7 | 21.1/26.0 |
loop | 37.3/36.9 | 37.6/38.7 | 23.8/22.3 | 33.2/34.3 |
border | 19.6/18.4 | 20.2/19.6 | 11.1/10.5 | 23.6/17.1 |
Obligate/Transient | ||||
α | 23.5/17.6 | 26.0/17.4 | 31.7/24.0 | 27.5/19.3 |
β | 18.6/22.7 | 15.0/23.3 | 29.7/38.9 | 20.4/27.8 |
loop | 37.5/40.8 | 38.2/39.9 | 25.4/26.7 | 33.8/36.2 |
border | 20.4/18.9 | 20.8/19.3 | 13.2/10.4 | 18.2/16.7 |
Bound/Unbound | ||||
α | 15.0/15.0 | 17.6/17.8 | 23.7/24.0 | 19.1/19.4 |
β | 18.2/17.7 | 21.9/22.0 | 39.7/40.1 | 26.9/27.1 |
loop | 46.4/46.8 | 40.1/40.0 | 25.1/24.8 | 36.2/36.2 |
border | 20.2/20.3 | 20.3/20.0 | 11.4/11.0 | 17.6/17.3 |