BMC Structural Biology

Table 1 Columns 2 − 4 show the native PDB ID, number of amino acids and fold topology for each of the 15 target protein systems.

From: A population-based evolutionary search approach to the multiple minima problem in de novo protein structure prediction

	Native PDB ID	Size	Fold Topology
				% α	% β
1	1bq9	54	α/β	16	25
2	1dtdB	61	α/β	15	46
3	1isuA	62	α/β	15	19
4	1c8cA	64	α/β	22	48
5	1sap	66	α/β	30	44
6	1hz6A	67	α/β	31	42
7	1wapA	68	β	0	62
8	1fwp	69	α/β	30	26
9	1ail	70	α	84	0
10	1dtjA	76	α/β	26	46
11	1aoy	78	α/β	41	10
12	1cc5	83	α	47	4
13	2ci2	83	α/β	16	21
14	1tig	90	α/β	32	32
15	2ezk	93	α	68	0

Columns 5 and 6 break the fold topology down as the percentage of amino acids which are part of α-helices and β-sheets.

Back to article page

ISSN: 1472-6807

Contact us

General enquiries: ORSupport@springernature.com