Table 5 Performance comparison of our results with the other methods CASTp, LIGSITE, PASS, SURFNET and VISGRID
From: A simple method for finding a protein’s ligand-binding pockets
48 Unbound structures | 86 Unbound structures | |
|---|---|---|
(Top 1) | (Top 1) | |
CAST | 31 (64.6%) | 66 (76.7%) |
LIGSITE | 36 (75.0%) | 69 (80.2%) |
PASS | 27 (56.3%) | 54 (62.8%) |
SURFNET | 19 (39.6%) | 63 (73.3%) |
VISGRID: Top 0.8% voxels | 34 (70.8%) | 55 (64.0%) |
Our method: Overlap 0.8 | 24 (50%) | 66 (78%) |