Table 1 Status of near-complete structural proteomes as of 22 February 2005. How many proteins may be assigned folds in near-complete proteomes? The status for five near-complete prokaryotes are shown. E. coli, a well-studied bacteria that is not considered a minimal organism, is included for comparison.
Organism | Total # of proteins | # of soluble, globular proteins | # of soluble, non-globular proteins | # of membrane proteins | # of folds assigned | % folds assigned (of total) | % folds assigned(of soluble, globular) | # of remaining soluble, globular proteins | # of remaining soluble, non-globular proteins | # of remaining membrane proteins |
|---|---|---|---|---|---|---|---|---|---|---|
Candidatus Blochmannia floridanus | 583 | 451 | 12 | 120 | 502 | 86.1% | 95.6% | 20 | 3 | 58 |
Wigglesworthia glossinidia brevipalpis | 612 | 536 | 28 | 217 | 508 | 83.0% | 94.8% | 28 | 7 | 69 |
Buchnera aphidicola (subsp. Acyrthosiphon pisum) | 572 | 446 | 39 | 87 | 495 | 86.5% | 94.4% | 25 | 9 | 43 |
Mycoplasma genitalium | 486 | 341 | 34 | 111 | 350 | 72.0% | 87.1% | 44 | 10 | 82 |
Tropheryma whipplei (strain TW08/27) | 781 | 430 | 55 | 127 | 556 | 71.2% | 87.0% | 56 | 15 | 154 |
Escherichia coli | 4338 | 3130 | 146 | 1062 | 2945 | 67.9% | 78.0% | 688 | 76 | 629 |