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Table 2 Comparison of mainchain RMSD under l.0Å C α restraint.

From: Rapper tk: a versatile engine for discrete restraint-based conformational sampling of macromolecules

 

RAPPER

Rapper tk Forward

Rapper tk Backward

Target

Mainchaina

C α b

Mainchaina

C α b

Mainchaina

C α b

1cem

0.69 (0.01)

0.66 (0.01)

0.69 (0.01)

0.67 (0.01)

0.68 (0.01)

0.66 (0.01)

1nif

0.72 (0.01)

0.67 (0.01)

0.71 (0.01)

0.67 (0.01)

0.72 (0.02)

0.67 (0.02)

1php

0.70 (0.01)

0.66 (0.01)

0.70 (0.01)

0.66 (0.01)

0.70 (0.01)

0.66 (0.01)

3app

0.71 (0.02)

0.67 (0.01)

0.72 (0.02)

0.67 (0.01)

0.70 (0.01)

0.66 (0.01)

3pte

0.71 (0.01)

0.67 (0.01)

0.71 (0.01)

0.67 (0.01)

0.71 (0.01)

0.67 (0.01)

4enl

0.72 (0.02)

0.68 (0.01)

0.71 (0.02)

0.67 (0.02)

0.71 (0.01)

0.67 (0.01)

5cpa

0.73 (0.02)

0.68 (0.02)

0.73 (0.02)

0.67(0.01)

0.72 (0.02)

0.67 (0.02)

8abp

0.71 (0.01)

0.67 (0.01)

0.72 (0.02)

0.67(0.02)

0.71 (0.01)

0.67 (0.01)

8tn:E

0.71 (0.02)

0.67 (0.01)

0.70 (0.02)

0.67(0.02)

0.71 (0.01)

0.67 (0.01)

  1. aEnsemble average main chain RMSD.
  2. bEnsemble average C α RMSD.