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Table 6 Correlation coefficients for whole set of models.

From: Evaluation of the structural quality of modeled proteins by using globularity criteria

 

RMS

GDT_TS

MaxSub

Z-score [Prosa]

0.16

0.04

-0.026

Modcheck score

-0.18

-0.11

-0.05

Victor/FRST function

0.16

-0.35

-0.27

Z-score [Anolea]

0.16

-0.04

-0.14

Globularity score

0.56

-0.4

-0.074

MM-type H-bonds

0.25

-0.12

0.37

Void number

-0.17

0.036

-0.093

Total accessibility

0.51

-0.40

0.0066

Water molecules

0.54

-0.36

0.077

  1. In columns we report the correlation coefficients between the quality assessment methods (Prosa, Modcheck, Victor/FRST, Anolea and Globularity score), as well as our four individual features (MM-type H-bonds, void number, water molecules and total accessibility), and three correct quality measures (i.e. RMSD, GDT_TS and MaxSub)
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BMC Structural Biology

ISSN: 1472-6807

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