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Table 1 Percentage of modified structural letters in the complex set

From: Structural deformation upon protein-protein interaction: A structural alphabet approach

  Type of complex
  Enzyme-substrate Antibody-antigen Others All types
rmsd rangea N C b MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeeOta40aa0baaSqaaiabdoeadbqaaiabdkgaIbaaaaa@2F81@ N T c MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeeOta40aa0baaSqaaiabdsfaubqaaiabdogaJbaaaaa@2FA5@ %d N C N T % N C N T % N C N T %
less than 1 Å 29 5145 29% 17 2937 22% 45 8358 34% 91 16440 30%
1 to 2 Å 18 2786 36% 11 2539 38% 28 6245 42% 57 11570 40%
2 to 3 Å 4 509 42% 0 - - 11 2485 47% 15 2994 46%
more than 3 Å 0 - - 2 425 29% 6 927 61% 8 1352 51%
All rmsd 51 8440 32% 30 5901 29% 90 18015 40% 171 32356 36%
Control set 19 4072 28%          
  1. a: Cα root mean square deviation between bound and unbound conformations, b: number of protein chains involved, c: total number of structural letters involved, d: percentage of structural letters that differ between bound and unbound conformation.