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Table 2 Mapping distribution of SCOP onto CATH nodes

From: Systematic comparison of SCOP and CATH: a new gold standard for protein structure analysis

F > 0

Unmapped

C

A

T

H

fold class

0

4

2

1

4

Fold

0

0

5

504

236

superfamily

0

0

2

32

1'224

Family

0

0

1

9

2'218

F > 0.8

Unmapped

C

A

T

H

fold class

8

2

0

0

1

Fold

125

0

4

439

177

superfamily

236

0

1

24

997

Family

1'055

0

1

6

1'166

  1. Number of inner nodes from a hierarchy level in SCOP mapping best to a node from some level in CATH. Consistent mapping are displayed in bold. Two different F-measure thresholds of 0 and 0.8 are shown. For example, 504 SCOP folds map best to a CATH topology node given a threshold of 0 dropping down to 439 nodes for a F-measure threshold of 0.8.
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BMC Structural Biology

ISSN: 1472-6807

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