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Table 6 Occurence of the 7 states, defined according to [53], across the four datasets (Numbers in parenthesis indicate percentage occurrence.)

From: Small local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifs

 

DESCRIPTION

 

Occurrence

  

STATE

α (°)

γ (°)

ε-ζ (°)

RNA

Free

Complex

HTH

     

A-like (Z p > 1.3 Ã…)

B-like (Z p ≤ 0.8 Å)

  

1

150–360

0–125 or 270–360

BI

534 (96.7)

335 (85.5)

339 (81.1)

1933 (78.8)

2259 (72.5)

2

220–360

125–270

-

0 (0.0)

0 (0.0)

0 (0.0)

38 (1.5)

40 (1.3)

3

0–220

125–240

BII

2 (0.4)

0 (0.0)

3 (0.7)

48 (2.0)

34 (1.1)

4

0–150

0–125

-

0 (0.0)

0 (0.0)

0 (0.0)

6 (0.2)

29 (0.9)

5

0–220

125–240

BI

15 (2.7)

47 (12.0)

1 (0.2)

58 (2.4)

97 (3.1)

6

0–220

240–270

-

1 (0.2)

8 (2.0)

4 (1.0)

125 (5.1)

366 (11.7)

7

150–360

0–125 or 270–360

BII

0 (0.0)

2 (0.5)

71 (17.0)

246 (10.0)

293 (9.4)