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Fig. 3 | BMC Structural Biology

Fig. 3

From: Molecular dynamics simulation of the opposite-base preference and interactions in the active site of formamidopyrimidine-DNA glycosylase

Fig. 3

Angles C1′[oxoG0]…N[Pro1]…Cδ[Pro1] (a), O4′[oxoG0]…C1′[oxoG0]…N[Pro1] (b) and N9[oxoG0]…C1′[oxoG0]…N[Pro1] (c) in the models. Moving average of 50 consecutive snapshots is plotted vs time. The traces are color-coded: dark cyan, PRN-GLH-C; light lime, PRN-GLH-Aa; coral, PRN-GLH-As; olive, PRN-GLU-C; dark magenta, PRN-GLU-Aa; light blue, PRN-GLU-As; magenta, PRO-GLH-C; blue, PRO-GLH-Aa; red, PRO-GLH-As; cyan, PRO-GLU-C; yellow, PRO-GLU-Aa; green, PRO-GLU-As

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