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Table 1 Mean r.m.s.d. values of the models and their standard deviations (Å) over the last 8 ns of the runs

From: Molecular dynamics simulation of the opposite-base preference and interactions in the active site of formamidopyrimidine-DNA glycosylase

  PRN-GLH PRN-GLU PRO-GLH PRO-GLU
  Global
oxoG:C 1.50 ± 0.06 1.58 ± 0.07 1.69 ± 0.07 1.51 ± 0.05
oxoG:A(anti) 1.75 ± 0.05 1.43 ± 0.06 1.66 ± 0.06 1.45 ± 0.06
oxoG:A(syn) 1.68 ± 0.06 1.53 ± 0.06 1.41 ± 0.06 1.74 ± 0.06
  Active site
oxoG:C 1.37 ± 0.10 1.55 ± 0.08 1.60 ± 0.13 1.58 ± 0.11
oxoG:A(anti) 1.89 ± 0.06 1.57 ± 0.08 2.16 ± 0.06 1.86 ± 0.07
oxoG:A(syn) 1.66 ± 0.12 1.61 ± 0.06 1.44 ± 0.10 1.92 ± 0.13