Fig. 8
From: re-TAMD: exploring interactions between H3 peptide and YEATS domain using enhanced sampling
Peptide conformations. Distribution of ϕ and ψ backbone dihedral angles in the peptides pt13 (a) pt7 (b) and pt3 (c) along the re-TAMD trajectories [red: TAMDYpt13 (a), TAMDYpt7 (b), TAMDYpt3 (c)], the holo YEATS MD trajectories [blue: MDYpt13 (a), MDYpt7 (b), MDYpt3 (c)], and the isolated peptide MD trajectories [green: MDpt13 (a), MDpt7 (b), MDpt3 (c)]. The dihedral angles were computed with a python script using the MDAnalysis module [52]