Table 1 Pipelines used to generate each of the models presented in this study. The numbers represent the sequence in which each software was used
From: Characterization of putative proteins encoded by variable ORFs in white spot syndrome virus genome
Model | HHBLITS | HHPRED | Modeller | Swiss-model | Phyre2 | ITASSER | PSIPRED |
|---|---|---|---|---|---|---|---|
wsv249 (ANK) | 1 | 2 | – | 3 | – | – | – |
wsv249 (RING) | 1 | 2 | – | 3 | – | – | – |
wsv463a | 1 | 2 | 3 | – | – | – | – |
wsv477 | 1 | 2 | 3 | – | – | – | – |
wsv479 | – | – | – | 2 | – | – | 1 |
wsv492 | – | 1 | – | 2 | – | – | – |
wsv497 | – | – | – | 2 | – | – | 1 |